Journal: Frontiers in Microbiology

Article Title: Co-Occurrence of Listeria spp. and Spoilage Associated Microbiota During Meat Processing Due to Cross-Contamination Events

doi: 10.3389/fmicb.2021.632935

Figure Lengend Snippet: (A) Change in alpha diversity indices of meat samples over time. Boxes indicate the interquartile range (from 75 to 25th) of the data. Whiskers extend to the most extreme value within 1.5 times interquartile range and dots represent outliers beyond that range. (B) Non-metric multidimensional scaling (nMDS) plot of Bray-Curtis distances based on 16S ribosomal RNA (rRNA) gene libraries obtained from meat samples. Each point represents values from individual libraries with colors expressing meat samples from different positions along the processing line.

Article Snippet: The near-full-length 16S rRNA gene amplicon libraries were prepared and sequenced according to the official Pacbio guidelines at the Vienna Biocenter Core Facilities NGS Unit.

Techniques: Expressing

Journal: Frontiers in Microbiology

Article Title: Co-Occurrence of Listeria spp. and Spoilage Associated Microbiota During Meat Processing Due to Cross-Contamination Events

doi: 10.3389/fmicb.2021.632935

Figure Lengend Snippet: Phylum-level classification of 16S rRNA gene sequence reads parted by sampling position and type (meat or environment). Data represent average of amplicon sequence variant (ASV) counts from replicate libraries for each category. Sample categories are abbreviated: “product” (P), “food contact surface” (FCS), “non-FCS” (NFCS), and “personnel” (PE).

Article Snippet: The near-full-length 16S rRNA gene amplicon libraries were prepared and sequenced according to the official Pacbio guidelines at the Vienna Biocenter Core Facilities NGS Unit.

Techniques: Sequencing, Sampling, Amplification, Variant Assay

Journal: Frontiers in Microbiology

Article Title: Co-Occurrence of Listeria spp. and Spoilage Associated Microbiota During Meat Processing Due to Cross-Contamination Events

doi: 10.3389/fmicb.2021.632935

Figure Lengend Snippet: Heatmap of the top 50 most abundant genera grouped by position and split by type. Data represent average of ASV counts from replicate 16S rRNA gene libraries for each category. Sample categories are abbreviated: “product” (P), “food contact surface” (FCS), “non-FCS” (NFCS), and “personnel” (PE).

Article Snippet: The near-full-length 16S rRNA gene amplicon libraries were prepared and sequenced according to the official Pacbio guidelines at the Vienna Biocenter Core Facilities NGS Unit.

Techniques: